Publications
First author
BioRxiv 2026van Gerwen Predicting cellular functions of human phosphositesdoi.org/10.64898/2026.05.22.727149
BioRxiv 2025van Gerwen Mapping the functional importance of site-specific ubiquitination across the human proteomedoi.org/10.1101/2025.10.08.681129
eLife 2024van Gerwen The genetic and dietary landscape of the muscle insulin signalling networkdoi.org/10.7554/eLife.89212.3
Nature Communications 2023van Gerwen* Phosphoproteomics reveals rewiring of the insulin signaling network and multi-nodal defects in insulin resistancedoi.org/10.1038/s41467-023-36549-2
Biochem Soc Trans 2023van Gerwen Insulin signalling and GLUT4 trafficking in insulin resistancedoi.org/10.1042/BST20221066
Middle author
BioRxiv 2026 Repurposing UBE2W for programmable protein ubiquitylationdoi.org/10.1101/2025.09.22.676137
BioRxiv 2026 Capabilities, specificity gaps and training-data dependence of AlphaFold3 across diverse application areasdoi.org/10.64898/2026.07.13.738147
BioRxiv 2024 Site-specific metabolic labeling reveals proteome-wide phospho-dynamicsdoi.org/10.1101/2024.07.23.604744
Developmental Cell 2024 Waves of regulated protein expression and phosphorylation rewire the proteome to drive gametogenesis in budding yeastdoi.org/10.1016/j.devcel.2024.05.025
Education
Skills and focus areas
R, Python, Bash, Agentic coding
Machine learning, Proteomics, PTM-omics, Protein structure prediction, Next-generation sequencing analysis, Microbial image analysis
Computational systems biology, Cell signaling, Post-translational modifications, Protein biology, Genetic variation, Metabolic disease
English (native), Mandarin (working proficiency), French (working proficiency), German (advanced)